C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Sp3 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465379 SP3-004 ENSG00000172845 9606 - 2:173908532-173916832 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000465379
Transcript ID Colon
ENST00000465379 2.777±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0001 UCNEbase 2:173198009-174351945
CIL_0004JD CIL_0004JD_0001 CGP 2:173354820-173965702
CIL_0008JW CIL_0008JW_0001 VISTA 2:173820816-174422736
CIL_0008K1 CIL_0008K1_0001 VISTA 2:173824009-174425635
CIL_0008S8 CIL_0008S8_0001 VISTA 2:173876675-174477772
CIL_0003II CIL_0003II_0002 CGP 2:173906459-174248698

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066003 Sp3-002 protein_coding Mus_musculus 0 2776
ENSMUST00000102689 Sp3-001 protein_coding Mus_musculus 0 2776
ENSMUST00000133615 Sp3-003 processed_transcript Mus_musculus 0 2772
ENSMUST00000129565 Sp3-005 processed_transcript Mus_musculus 0 558

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