C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trans-acting transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133615 Sp3-003 ENSMUSG00000027109 10090 - 2:72936652-72979286 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133615 9.815±3.11 14.491±1.07 5.122±0.00 4.013±3.14 9.489±5.02 10.641±0.63 2.080±0.95 4.276±1.55 6.019±3.98 8.749±0.26 1.824±0.53 11.867±5.26 7.731±3.50 2.227±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0002 UCNEbase 2:72378722-73287933
CIL_0004JD CIL_0004JD_0002 CGP 2:72476159-72980446
CIL_0008JW CIL_0008JW_0002 VISTA 2:72839371-73441413
CIL_0008K1 CIL_0008K1_0002 VISTA 2:72842671-73444272
CIL_0008S8 CIL_0008S8_0002 VISTA 2:72879758-73480791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310015 SP3-001 protein_coding Homo_sapiens 0 5409
ENST00000414049 SP3P-001 processed_pseudogene Homo_sapiens 0 2252
ENST00000416195 SP3-002 protein_coding Homo_sapiens 0 5234
ENST00000418194 SP3-003 protein_coding Homo_sapiens 0 5555
ENST00000462904 SP3-007 processed_transcript Homo_sapiens 0 638
ENST00000465379 SP3-004 retained_intron Homo_sapiens 0 2772
ENST00000483084 SP3-005 processed_transcript Homo_sapiens 0 274
ENST00000490182 SP3-008 processed_transcript Homo_sapiens 0 436

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