C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003II_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007812-ENSDARG00000044565 CGP 7955 6:10632712-10664451
GeneTranscriptPositionBiotype
ENSDARG00000007812 (sp3b)
Sp3b transcription factor 		ENSDART00000002247 (sp3b-002) 10633110-10639004 protein_coding
ENSDART00000123684 (sp3b-201) 10644001-10647664 protein_coding
ENSDART00000150942 (sp3b-003) 10636641-10651312 protein_coding
ENSDART00000151484 (sp3b-001) 10632712-10639868 protein_coding
ENSDARG00000044565 (ola1)
Obg-like ATPase 1 		ENSDART00000045299 (ola1-001) 10652213-10664451 protein_coding
ENSDART00000135093 (ola1-002) 10656017-10663884 protein_coding
ENSDARG00000096373 (si:dkey-34m19.5)
si:dkey-34m19.5 		ENSDART00000151017 (si:dkey-34m19.5-001) 10638291-10644909 antisense

Danio rerio Ensembl (Zv9)

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CIL_0003II_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172845-ENSG00000138430 CGP 9606 2:173906459-174248698
GeneTranscriptPositionBiotype
ENSG00000138430 (OLA1)
Obg-like ATPase 1 		ENST00000284719 (OLA1-001) 174072447-174248698 protein_coding
ENST00000344357 (OLA1-002) 174075008-174248599 protein_coding
ENST00000392560 (OLA1-008) 174075409-174124315 processed_transcript
ENST00000409546 (OLA1-003) 174075237-174248360 protein_coding
ENST00000427472 (OLA1-004) 174223057-174247287 protein_coding
ENST00000428402 (OLA1-009) 174075010-174248475 protein_coding
ENST00000429575 (OLA1-005) 174082010-174217946 protein_coding
ENST00000462000 (OLA1-006) 174080908-174123670 retained_intron
ENST00000497760 (OLA1-007) 174075190-174079351 retained_intron
ENSG00000172845 (SP3)
Sp3 transcription factor 		ENST00000310015 (SP3-001) 173906459-173965702 protein_coding
ENST00000416195 (SP3-002) 173908530-173964553 protein_coding
ENST00000418194 (SP3-003) 173908530-173964219 protein_coding
ENST00000462904 (SP3-007) 173955817-173965310 processed_transcript
ENST00000465379 (SP3-004) 173908532-173916832 retained_intron
ENST00000483084 (SP3-005) 173956074-173963379 processed_transcript
ENST00000490182 (SP3-008) 173956081-173964885 processed_transcript
ENSG00000235414 (AC016737.1)
 ENST00000461543 (AC016737.1-001) 174043008-174043880 processed_pseudogene
ENSG00000243770 (RN7SL65P)
RNA, 7SL, cytoplasmic 65, pseudogene 		ENST00000485221 (RN7SL65P-201) 174240143-174240457 misc_RNA
ENSG00000260868 (RP11-394I13.1)
 ENST00000563759 (RP11-394I13.1-001) 174025280-174027163 lincRNA
ENSG00000270799 (RP11-451F14.1)
 ENST00000605472 (RP11-451F14.1-001) 174171891-174172725 processed_pseudogene
ENSG00000271151 (RP11-394I13.2)
 ENST00000605739 (RP11-394I13.2-001) 173968351-173969418 lincRNA
ENSG00000273258 (RP11-394I13.3)
 ENST00000609273 (RP11-394I13.3-001) 174011856-174012975 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003II_0001ENSDARG00000007812ENSDART00000002247ENSDART00000123684ENSDART00000150942ENSDART00000151484ENSDARG00000044565ENSDART00000045299ENSDART00000135093ENSDARG00000096373ENSDART00000151017CIL_0003II_0002ENSG00000138430ENST00000284719ENST00000344357ENST00000392560ENST00000409546ENST00000427472ENST00000428402ENST00000429575ENST00000462000ENST00000497760ENSG00000172845ENST00000310015ENST00000416195ENST00000418194ENST00000462904ENST00000465379ENST00000483084ENST00000490182ENSG00000235414ENST00000461543ENSG00000243770ENST00000485221ENSG00000260868ENST00000563759ENSG00000270799ENST00000605472ENSG00000271151ENST00000605739ENSG00000273258ENST00000609273
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003II_0001ENSDARG00000007812ENSDART00000002247ENSDART00000151484ENSDARG00000044565ENSDART00000045299ENSDART00000135093ENSDARG00000096373ENSDART00000151017CIL_0003II_0002ENSG00000138430ENST00000284719ENST00000344357ENST00000428402ENST00000429575ENSG00000172845ENST00000310015ENST00000416195ENST00000418194ENST00000465379ENSG00000235414ENST00000461543ENSG00000243770ENST00000485221ENSG00000260868ENST00000563759ENSG00000270799ENST00000605472ENSG00000271151ENST00000605739ENSG00000273258ENST00000609273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007812 ENSDART00000002247 N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 0.824±0.00 N/A 1.942±0.00 N/A N/A N/A
ENSDART00000123684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151484 N/A N/A N/A N/A N/A N/A 0.364±0.03 0.252±0.10 N/A N/A N/A N/A N/A N/A
ENSDARG00000044565 ENSDART00000045299 N/A N/A N/A 16.206±9.55 N/A N/A 29.506±23.01 15.643±18.60 20.951±0.00 N/A 13.758±0.00 N/A N/A N/A
ENSDART00000135093 N/A N/A N/A 22.050±7.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096373 ENSDART00000151017 N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138430 ENST00000284719 N/A N/A 0.490±0.00 4.537±0.17 0.897±0.00 0.764±0.00 0.397±0.00 N/A 1.016±0.00 0.976±0.00 1.477±0.00 1.584±0.57 N/A N/A
ENST00000344357 18.761±0.00 19.668±0.00 2.833±0.00 25.480±4.30 14.340±7.64 16.697±8.93 9.388±5.38 15.540±10.16 9.247±1.67 6.630±3.44 16.988±12.08 29.255±19.25 22.451±2.91 25.795±4.24
ENST00000392560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428402 N/A N/A N/A N/A N/A N/A 3.054±0.00 N/A N/A 3.135±0.00 5.266±0.00 6.010±0.00 6.375±1.91 N/A
ENST00000429575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.572±0.00 23.453±0.00 30.148±0.00
ENST00000462000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172845 ENST00000310015 2.809±0.00 3.784±0.00 0.824±0.00 0.874±0.17 2.134±0.46 0.813±0.00 0.893±0.00 N/A 1.318±0.74 2.001±0.90 N/A 1.745±0.16 0.942±0.23 0.904±0.00
ENST00000416195 5.266±0.00 4.049±0.00 N/A 3.600±0.04 11.879±3.79 4.397±0.26 2.134±1.12 4.495±0.13 1.977±0.00 8.030±1.19 5.643±1.91 8.415±0.76 5.398±0.36 11.377±5.95
ENST00000418194 11.447±0.00 5.760±0.00 2.593±0.00 3.727±1.16 4.734±0.00 10.994±3.39 3.791±0.38 4.413±1.40 7.720±6.41 6.640±1.92 1.724±0.00 8.449±5.24 2.836±2.05 3.491±1.43
ENST00000462904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465379 N/A N/A N/A N/A N/A 2.777±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235414 ENST00000461543 N/A N/A 0.151±0.00 0.020±0.00 N/A N/A N/A 0.019±0.00 0.073±0.00 0.051±0.00 N/A N/A 0.048±0.01 0.043±0.00
ENSG00000243770 ENST00000485221 N/A 0.203±0.00 N/A N/A 1.125±0.00 N/A N/A N/A N/A 0.303±0.00 N/A 2.765±0.00 N/A N/A
ENSG00000260868 ENST00000563759 0.290±0.00 0.345±0.00 N/A 0.013±0.00 0.302±0.00 N/A 0.023±0.01 0.139±0.00 0.217±0.00 N/A N/A 0.055±0.02 0.941±0.37 0.077±0.05
ENSG00000270799 ENST00000605472 N/A 0.162±0.00 N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271151 ENST00000605739 0.033±0.00 0.443±0.00 0.234±0.00 0.089±0.02 0.066±0.00 0.065±0.05 0.058±0.01 0.169±0.00 0.131±0.08 0.016±0.00 0.133±0.00 0.572±0.18 0.141±0.05 0.290±0.02
ENSG00000273258 ENST00000609273 0.108±0.00 0.055±0.00 N/A 0.585±0.00 0.113±0.00 N/A N/A N/A N/A 0.092±0.00 N/A 0.250±0.10 0.204±0.02 0.152±0.00

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