C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466725 CTC-550B14.1-001 ENSG00000243494 9606 + 19:54973817-54974417 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungMuscleENST00000466725
Transcript ID Adipose Colon Liver Lung Muscle
ENST00000466725 0.531±0.00 0.357±0.00 0.204±0.00 0.414±0.00 0.351±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 342
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 339
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 331
ENSMUST00000081987 Rpl36a-ps1-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000174479 Dtnb-005 protein_coding Mus_musculus 0 315
ENSMUST00000116105 Gm11970-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 2.99878e-43 178
ENSMUST00000152266 Rpl36a-002 retained_intron Mus_musculus 1.00053e-42 176
ENSMUST00000169457 Rpl36a-006 retained_intron Mus_musculus 4e-37 158

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