C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoenolpyruvate carboxykinase 1 (soluble)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467047 PCK1-002 ENSG00000124253 9606 + 20:57561080-57566367 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryENST00000467047
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary
ENST00000467047 9.349±0.00 0.480±0.00 6.421±0.00 0.110±0.09 8.731±0.00 1.058±0.00 0.176±0.00 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0001 VISTA 20:57109440-57710361
CIL_0008BA CIL_0008BA_0001 VISTA 20:57139654-57744237
CIL_0005JC CIL_0005JC_0001 CGP 20:57495966-57568112
CIL_0005K4 CIL_0005K4_0001 CGP 20:57561080-57620576

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029017 Pck1-001 protein_coding Mus_musculus 0 614
ENSMUST00000136885 Pck1-003 retained_intron Mus_musculus 0 507
ENSMUST00000151269 Pck1-002 retained_intron Mus_musculus 0 267
ENSDART00000008752 pck1-001 protein_coding Danio_rerio 9e-30 137
ENSDART00000148691 pck1-002 retained_intron Danio_rerio 1e-27 130

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