C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467439 RP11-162K6.1-001 ENSG00000244002 9606 + 4:80161129-80162011 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungOvaryENST00000467439
Transcript ID Adrenal Brain Breast Colon Kidney Lung Ovary
ENST00000467439 0.056±0.00 0.020±0.00 0.039±0.00 0.018±0.00 0.038±0.00 0.017±0.00 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069U CIL_00069U_0001 CGP 4:79901149-80204329

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 235

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