C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHQ1, H/ACA ribonucleoprotein assembly factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468371 SHQ1-002 ENSG00000144736 9606 - 3:72749277-72795590 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungENST00000468371
Transcript ID Breast Colon Kidney Liver Lung
ENST00000468371 0.778±0.00 0.666±0.00 0.264±0.00 0.257±0.00 0.625±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T9 CIL_0001T9_0002 CGP 3:72371825-72861914
CIL_00059P CIL_00059P_0002 CGP 3:72749277-72998138

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170667 Shq1-201 protein_coding Mus_musculus 0 261
ENSMUST00000089245 Shq1-002 protein_coding Mus_musculus 0 261
ENSMUST00000113312 Shq1-001 protein_coding Mus_musculus 0 261

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