C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility (minor) 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469097 HM13-006 ENSG00000101294 9606 + 20:31545028-31569418 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungTestisENST00000469097
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Testis
ENST00000469097 25.115±0.00 50.393±0.00 12.370±0.00 30.923±0.00 27.321±0.00 8.345±0.00 68.860±0.00 69.493±0.00 19.947±0.00 30.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001A0 CIL_0001A0_0001 CGP 20:31475293-31577923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089059 H13-002 protein_coding Mus_musculus 0 706
ENSMUST00000125366 H13-001 protein_coding Mus_musculus 0 706
ENSMUST00000079247 H13-003 protein_coding Mus_musculus 0 407
ENSMUST00000129439 H13-004 retained_intron Mus_musculus 5e-35 152

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