C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | collagen, type I, alpha 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000469732  |
COL1A2-008 |
ENSG00000164692 |
9606 | + |
7:94423988-94425787  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006DY | CIL_0006DY_0001 | CGP | 7:93962762-94431232 |
| CIL_00082O | CIL_00082O_0001 | VISTA | 7:94046650-94649568 |
| CIL_0007XR | CIL_0007XR_0001 | VISTA | 7:94067785-94669696 |
| CIL_00095G | CIL_00095G_0001 | VISTA | 7:94074791-94676705 |
| CIL_0008ZR | CIL_0008ZR_0001 | VISTA | 7:94144032-94745602 |
| CIL_0004SO | CIL_0004SO_0002 | CGP | 7:94394561-94557019 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000031668
|
Col1a2-001 | protein_coding | Mus_musculus | 0 | 392 |
|
ENSMUST00000155687
|
Col1a2-006 | retained_intron | Mus_musculus | 2e-33 | 147 |
