C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469899 RPL21P18-001 ENSG00000213343 9606 + 12:66037235-66037714 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungMuscleTestisENST00000469899
Transcript ID Adipose Adrenal Brain Breast Liver Lung Muscle Testis
ENST00000469899 0.027±0.00 0.055±0.00 0.082±0.00 0.053±0.00 0.025±0.00 0.128±0.00 0.050±0.00 0.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088X CIL_00088X_0001 VISTA 12:65441147-66043028

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000121662 Gm14053-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000034094 Gins3-201 protein_coding Mus_musculus 0 243
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 1e-28 130

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