C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: prospero homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471129 PROX1-004 ENSG00000117707 9606 + 1:213983181-213997225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000471129
Transcript ID Testis
ENST00000471129 2.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J3 CIL_0007J3_0001 UCNEbase 1:213159436-214186583
CIL_00089Q CIL_00089Q_0001 VISTA 1:213807252-214408737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010319 Prox1-003 protein_coding Mus_musculus 0 1279
ENSMUST00000177288 Prox1-002 protein_coding Mus_musculus 0 1271
ENSMUST00000175916 Prox1-001 protein_coding Mus_musculus 0 1271
ENSDART00000077476 prox1a-001 protein_coding Danio_rerio 0 481

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