C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471204 RPL22-007 ENSG00000116251 9606 - 1:6186692-6209244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000471204
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000471204 19.150±0.00 43.443±0.00 58.868±0.00 49.246±0.00 29.064±0.00 52.219±0.00 83.647±0.00 43.129±0.00 58.314±0.00 118.112±0.00 119.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019L CIL_00019L_0002 CGP 1:6181269-6221299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 433
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 433
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 433
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 433
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000118297 Gm13196-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 0 318
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 0 285
ENSMUST00000150485 Rpl22-006 processed_transcript Mus_musculus 0 274
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 0 237
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 1.4013e-45 187

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