C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (aspartate/glutamate carrier), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472162 SLC25A13-005 ENSG00000004864 9606 - 7:96193148-96322136 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000472162
Transcript ID Ovary Placenta Testis
ENST00000472162 45.322±0.00 11.479±0.00 5.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AS CIL_0008AS_0001 VISTA 7:95767218-96367717
CIL_00053F CIL_00053F_0001 CGP 7:95772506-96322147
CIL_0008Z2 CIL_0008Z2_0001 VISTA 7:95775777-96376384
CIL_0008Z3 CIL_0008Z3_0001 VISTA 7:95796967-96398368
CIL_0007W8 CIL_0007W8_0001 VISTA 7:95945535-96548789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169197 Slc25a13-002 processed_transcript Mus_musculus 0 518
ENSMUST00000177805 Slc25a13-008 processed_transcript Mus_musculus 0 470
ENSMUST00000188414 Slc25a13-202 protein_coding Mus_musculus 0 351
ENSMUST00000015256 Slc25a13-001 protein_coding Mus_musculus 0 303
ENSMUST00000177698 Slc25a13-007 processed_transcript Mus_musculus 0 213
ENSMUST00000179756 Slc25a13-009 processed_transcript Mus_musculus 0 213

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