C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-C motif) ligand 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473642 CCL20-003 ENSG00000115009 9606 + 2:227815369-227817463 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartLiverOvaryPlacentaTestisENST00000473642
Transcript ID Adipose Adrenal Brain Heart Liver Ovary Placenta Testis
ENST00000473642 0.244±0.00 0.338±0.00 0.071±0.00 0.040±0.00 0.273±0.00 14.944±0.00 0.196±0.05 0.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076S CIL_00076S_0001 CGP 2:227813842-227924344

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113437 Ccl20-001 protein_coding Mus_musculus 0 303
ENSMUST00000186832 Ccl20-003 protein_coding Mus_musculus 0 298
ENSMUST00000027351 Ccl20-002 protein_coding Mus_musculus 0 209

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