C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00076S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115009-ENSG00000123977 CGP 9606 2:227813842-227924344
GeneTranscriptPositionBiotype
ENSG00000115009 (CCL20)
chemokine (C-C motif) ligand 20 		ENST00000358813 (CCL20-004) 227813854-227817534 protein_coding
ENST00000409189 (CCL20-001) 227813842-227817564 protein_coding
ENST00000473642 (CCL20-003) 227815369-227817463 processed_transcript
ENST00000489160 (CCL20-002) 227813843-227815984 retained_intron
ENSG00000123977 (DAW1)
dynein assembly factor with WDR repeat domains 1 		ENST00000309931 (DAW1-001) 227871607-227924341 protein_coding
ENST00000373666 (DAW1-002) 227871054-227924344 protein_coding
ENST00000440997 (DAW1-003) 227871635-227890000 protein_coding
ENST00000454999 (DAW1-004) 227871642-227903086 nonsense_mediated_decay
ENST00000472604 (DAW1-005) 227889513-227895591 processed_transcript
ENSG00000183514 (TDGF1P2)
teratocarcinoma-derived growth factor 1 pseudogene 2 		ENST00000413322 (TDGF1P2-001) 227870083-227870644 processed_pseudogene
CIL_00076S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026166-ENSMUSG00000053161 CGP 10090 1:83116766-83210574
GeneTranscriptPositionBiotype
ENSMUSG00000026166 (Ccl20)
chemokine (C-C motif) ligand 20 		ENSMUST00000027351 (Ccl20-002) 83116766-83119166 protein_coding
ENSMUST00000113437 (Ccl20-001) 83116774-83119167 protein_coding
ENSMUST00000186832 (Ccl20-003) 83116793-83119167 protein_coding
ENSMUSG00000053161 (Daw1)
dynein assembly factor with WDR repeat domains 1 		ENSMUST00000065403 (Daw1-004) 83159781-83210574 protein_coding
ENSMUST00000065436 (Daw1-002) 83159762-83210568 protein_coding
ENSMUST00000113436 (Daw1-001) 83159762-83210574 protein_coding
ENSMUST00000133079 (Daw1-005) 83159752-83179824 retained_intron
ENSMUST00000149342 (Daw1-003) 83159769-83210570 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076S_0001ENSG00000115009ENST00000358813ENST00000409189ENST00000473642ENST00000489160ENSG00000123977ENST00000309931ENST00000373666ENST00000440997ENST00000454999ENST00000472604ENSG00000183514ENST00000413322CIL_00076S_0002ENSMUSG00000026166ENSMUST00000027351ENSMUST00000113437ENSMUST00000186832ENSMUSG00000053161ENSMUST00000065403ENSMUST00000065436ENSMUST00000113436ENSMUST00000133079ENSMUST00000149342
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076S_0001ENSG00000115009ENST00000358813ENST00000409189ENST00000473642ENST00000489160ENSG00000123977ENST00000309931ENST00000373666ENST00000440997ENST00000454999ENST00000472604ENSG00000183514ENST00000413322CIL_00076S_0002ENSMUSG00000026166ENSMUST00000027351ENSMUST00000113437ENSMUST00000186832ENSMUSG00000053161ENSMUST00000065403ENSMUST00000065436ENSMUST00000113436ENSMUST00000133079ENSMUST00000149342
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115009 ENST00000358813 N/A 2.056±0.00 N/A N/A N/A 0.431±0.00 N/A 1.677±0.00 0.245±0.07 10.247±8.07 N/A 14.294±12.75 0.504±0.00 N/A
ENST00000409189 0.115±0.00 0.367±0.00 N/A 0.059±0.00 1.146±0.00 0.971±0.00 N/A N/A N/A 4.854±2.97 N/A 16.612±3.29 0.293±0.00 0.254±0.00
ENST00000473642 0.244±0.00 0.338±0.00 N/A 0.071±0.00 N/A N/A 0.040±0.00 N/A 0.273±0.00 N/A N/A 14.944±0.00 0.196±0.05 0.173±0.00
ENST00000489160 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A 3.433±3.40 N/A 0.046±0.00
ENSG00000123977 ENST00000309931 0.005±0.00 0.230±0.00 N/A 0.986±0.46 0.097±0.00 0.010±0.00 0.011±0.00 N/A N/A 2.062±0.84 N/A 1.247±1.14 0.692±0.64 38.627±13.40
ENST00000373666 0.024±0.00 N/A N/A N/A 0.050±0.00 0.023±0.00 0.023±0.00 0.060±0.00 N/A N/A N/A N/A 0.281±0.19 N/A
ENST00000440997 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454999 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.069±0.00 N/A 0.421±0.00 N/A N/A
ENST00000472604 N/A N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000183514 ENST00000413322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026166 ENSMUST00000027351 N/A N/A N/A N/A N/A 0.951±0.00 N/A 0.050±0.00 0.011±0.00 N/A N/A N/A N/A 0.050±0.00
ENSMUST00000113437 N/A N/A N/A 0.022±0.01 0.221±0.04 8.644±1.05 0.108±0.05 0.121±0.03 0.162±0.01 0.364±0.15 N/A N/A N/A N/A
ENSMUST00000186832 N/A N/A 0.038±0.00 0.012±0.00 N/A N/A N/A N/A 0.056±0.01 N/A 0.095±0.00 0.043±0.00 0.031±0.02 N/A
ENSMUSG00000053161 ENSMUST00000065403 N/A N/A 0.312±0.00 0.295±0.00 N/A N/A N/A 0.151±0.07 N/A 0.164±0.00 N/A 0.851±0.41 N/A 7.968±1.65
ENSMUST00000065436 0.049±0.00 N/A 0.948±0.05 N/A 0.035±0.00 N/A 0.038±0.01 0.127±0.03 0.009±0.00 0.499±0.00 0.039±0.00 1.146±0.39 0.031±0.03 4.375±0.53
ENSMUST00000113436 0.046±0.01 N/A N/A N/A N/A 0.102±0.03 0.023±0.00 N/A 0.008±0.00 0.190±0.00 N/A 0.524±0.13 0.039±0.02 3.342±0.00
ENSMUST00000133079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.121±0.54 N/A N/A
ENSMUST00000149342 N/A N/A 0.621±0.00 0.357±0.12 N/A N/A N/A 0.272±0.05 0.019±0.00 0.652±0.21 N/A 0.997±0.11 0.012±0.00 2.831±0.18

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