C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474911 RTN1-004 ENSG00000139970 9606 - 14:59596014-59607607 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonMuscleOvaryTestisENST00000474911
Transcript ID Adrenal Brain Colon Muscle Ovary Testis
ENST00000474911 0.891±0.00 84.349±23.62 1.078±0.08 0.034±0.00 0.299±0.12 1.243±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S5 CIL_0000S5_0001 CGP 14:59504539-59870966
CIL_0005ZY CIL_0005ZY_0002 CGP 14:59595976-60063559

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150156 Rtn1-002 processed_transcript Mus_musculus 0 878
ENSMUST00000078505 Rtn1-001 protein_coding Mus_musculus 0 878
ENSMUST00000021497 Rtn1-201 protein_coding Mus_musculus 0 876
ENSMUST00000137990 Rtn1-003 protein_coding Mus_musculus 0 865
ENSMUST00000144181 Rtn1-004 processed_transcript Mus_musculus 0 278

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