C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475225 SLC11A1-002 ENSG00000018280 9606 + 2:218382302-218388385 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverTestisENST00000475225
Transcript ID Adrenal Colon Liver Testis
ENST00000475225 1.306±0.00 0.133±0.00 0.241±0.00 0.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054V CIL_00054V_0001 CGP 2:218356856-218396894
CIL_0005VF CIL_0005VF_0001 CGP 2:218382029-218405941

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131511 Slc11a1-003 retained_intron Mus_musculus 0 335
ENSMUST00000136786 Slc11a1-004 processed_transcript Mus_musculus 0 329
ENSMUST00000027368 Slc11a1-001 protein_coding Mus_musculus 0 329
ENSMUST00000147233 Slc11a1-002 retained_intron Mus_musculus 0 329
ENSMUST00000187516 Slc11a1-011 protein_coding Mus_musculus 0 281
ENSMUST00000155865 Slc11a1-006 processed_transcript Mus_musculus 0 248

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