C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476147 RP11-587D21.1-001 ENSG00000240036 9606 + 11:27581680-27582055 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000476147
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000476147 0.117±0.00 0.836±0.00 0.904±0.00 0.118±0.00 0.186±0.00 0.157±0.12 0.355±0.00 0.035±0.00 0.110±0.00 0.149±0.00 0.359±0.24 0.461±0.05 0.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078E CIL_00078E_0002 CGP 11:27494576-27722058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 442
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 353

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