C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SH2 domain containing 1A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477673  |
SH2D1A-005 |
ENSG00000183918 |
9606 | + |
X:124346589-124371488  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000GB | CIL_0000GB_0002 | CGP | X:123859724-124422664 |
| CIL_0007YQ | CIL_0007YQ_0001 | VISTA | X:123916977-124518737 |
| CIL_0000AX | CIL_0000AX_0001 | CGP | X:123960212-124422664 |
| CIL_0000AW | CIL_0000AW_0001 | CGP | X:124346344-124963817 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005070 | NAS | SH3/SH2 adaptor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0006968 | NAS | cellular defense response |
| GO:0007267 | IDA | cell-cell signaling |
| GO:0009967 | IEA | positive regulation of signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000115070
|
Sh2d1a-002 | protein_coding | Mus_musculus | 3e-35 | 152 |
|
ENSMUST00000005839
|
Sh2d1a-001 | protein_coding | Mus_musculus | 1e-24 | 117 |
|
ENSMUST00000189753
|
Sh2d1a-006 | protein_coding | Mus_musculus | 1e-24 | 117 |
|
ENSMUST00000128393
|
Sh2d1a-005 | processed_transcript | Mus_musculus | 5e-18 | 95 |
|
ENSMUST00000129855
|
Sh2d1a-003 | processed_transcript | Mus_musculus | 5e-18 | 95 |
