C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH2 domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129855 Sh2d1a-003 ENSMUSG00000005696 10090 + X:42502453-42523697 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleOvaryENSMUST00000129855
Transcript ID Heart Liver Muscle Ovary
ENSMUST00000129855 0.019±0.00 0.003±0.00 0.014±0.00 0.018±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YQ CIL_0007YQ_0002 VISTA X:42042580-42644283
CIL_0000AX CIL_0000AX_0002 CGP X:42149317-42529330
CIL_0000AW CIL_0000AW_0002 CGP X:42502453-43429126

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360027 SH2D1A-006 protein_coding Homo_sapiens 0 320
ENST00000371139 SH2D1A-002 protein_coding Homo_sapiens 0 431
ENST00000477673 SH2D1A-005 protein_coding Homo_sapiens 5e-18 95

Loading