C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477964 RP11-889L3.1-001 ENSG00000218227 9606 + 5:178055604-178056194 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477964
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477964 0.594±0.00 0.787±0.00 0.580±0.29 0.300±0.20 0.325±0.25 0.038±0.00 0.363±0.27 0.039±0.00 0.418±0.31 1.220±0.00 0.469±0.50 0.260±0.13 2.217±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017548 Rpl19-001 protein_coding Mus_musculus 0 743
ENSMUST00000122422 Rpl19-ps11-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000092425 Rpl19-002 protein_coding Mus_musculus 0 737
ENSMUST00000121059 Rpl19-ps1-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000121251 Rpl19-ps12-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000159343 Gm16238-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000167150 Rpl19-ps4-201 processed_pseudogene Mus_musculus 0 595
ENSMUST00000121130 Gm15566-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000117145 Gm13216-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000134435 Rpl19-003 retained_intron Mus_musculus 1e-34 150

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