C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092425 Rpl19-002 ENSMUSG00000017404 10090 + 11:98026710-98030492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryPlacentaTestisENSMUST00000092425
Transcript ID Adrenal Ovary Placenta Testis
ENSMUST00000092425 88.487±38.45 318.683±118.22 125.005±0.00 13.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0000TJ CIL_0000TJ_0003 CGP 11:98001508-98030492
CIL_0006QM CIL_0006QM_0002 CGP 11:98026710-98053462

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IDA structural constituent of ribosome
GO:0006412 IC translation
GO:0022625 IDA cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225430 RPL19-001 protein_coding Homo_sapiens 0 859
ENST00000424919 RPL19P21-001 processed_pseudogene Homo_sapiens 0 719
ENST00000429272 AC068137.13-001 processed_pseudogene Homo_sapiens 0 628
ENST00000432746 RPL19P12-001 processed_pseudogene Homo_sapiens 0 741
ENST00000433839 RP11-159H3.1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000472309 RP11-84H6.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000477964 RP11-889L3.1-001 processed_pseudogene Homo_sapiens 0 737
ENST00000495884 RPL19P14-001 processed_pseudogene Homo_sapiens 0 545
ENST00000495944 RPL19P11-001 processed_pseudogene Homo_sapiens 0 590
ENST00000498753 RP11-343B5.1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000577741 RPL19-004 retained_intron Homo_sapiens 0 484
ENST00000579260 RPL19-002 protein_coding Homo_sapiens 0 845
ENST00000579374 RPL19-006 protein_coding Homo_sapiens 0 845
ENST00000580333 RPL19-005 retained_intron Homo_sapiens 0 348
ENST00000582193 RPL19-003 protein_coding Homo_sapiens 0 863
ENST00000585199 RPL19-007 protein_coding Homo_sapiens 0 435

Loading