C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L19, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121059 Rpl19-ps1-001 ENSMUSG00000064281 10090 + 1:85012114-85012704 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121059 6.731±2.05 2.741±0.34 19.569±2.88 10.467±0.88 4.487±2.01 5.395±2.33 1.973±0.45 3.874±0.89 8.284±9.67 3.074±0.87 0.274±0.17 7.182±4.04 1.258±1.74 1.199±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0006 CGP 1:84992690-85270566

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225430 RPL19-001 protein_coding Homo_sapiens 0 821
ENST00000415648 RPL19P20-001 processed_pseudogene Homo_sapiens 0 603
ENST00000424919 RPL19P21-001 processed_pseudogene Homo_sapiens 0 721
ENST00000429272 AC068137.13-001 processed_pseudogene Homo_sapiens 0 636
ENST00000432746 RPL19P12-001 processed_pseudogene Homo_sapiens 0 747
ENST00000433839 RP11-159H3.1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000438827 RP11-157F20.1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000472309 RP11-84H6.1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000477964 RP11-889L3.1-001 processed_pseudogene Homo_sapiens 0 732
ENST00000495884 RPL19P14-001 processed_pseudogene Homo_sapiens 0 534
ENST00000495944 RPL19P11-001 processed_pseudogene Homo_sapiens 0 597
ENST00000498753 RP11-343B5.1-001 processed_pseudogene Homo_sapiens 0 662
ENST00000577741 RPL19-004 retained_intron Homo_sapiens 0 472
ENST00000579260 RPL19-002 protein_coding Homo_sapiens 0 817
ENST00000579374 RPL19-006 protein_coding Homo_sapiens 0 798
ENST00000580333 RPL19-005 retained_intron Homo_sapiens 0 355
ENST00000582193 RPL19-003 protein_coding Homo_sapiens 0 813
ENST00000585199 RPL19-007 protein_coding Homo_sapiens 0 436

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