C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15566
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121130 Gm15566-001 ENSMUSG00000083772 10090 + 9:120316328-120316917 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLungOvaryPlacentaENSMUST00000121130
Transcript ID Adipose Bladder Brain Heart Lung Ovary Placenta
ENSMUST00000121130 0.348±0.00 0.019±0.00 0.043±0.03 0.081±0.00 0.134±0.00 0.068±0.00 0.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013U CIL_00013U_0002 CGP 9:120149742-120474841
CIL_0003YR CIL_0003YR_0002 CGP 9:120303936-120495327

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225430 RPL19-001 protein_coding Homo_sapiens 0 636
ENST00000424919 RPL19P21-001 processed_pseudogene Homo_sapiens 0 553
ENST00000429272 AC068137.13-001 processed_pseudogene Homo_sapiens 0 503
ENST00000432746 RPL19P12-001 processed_pseudogene Homo_sapiens 0 579
ENST00000433839 RP11-159H3.1-001 processed_pseudogene Homo_sapiens 0 551
ENST00000472309 RP11-84H6.1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000477964 RP11-889L3.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000495944 RPL19P11-001 processed_pseudogene Homo_sapiens 0 470
ENST00000498753 RP11-343B5.1-001 processed_pseudogene Homo_sapiens 0 512
ENST00000524262 RP11-546B8.1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000577741 RPL19-004 retained_intron Homo_sapiens 0 399
ENST00000579260 RPL19-002 protein_coding Homo_sapiens 0 632
ENST00000579374 RPL19-006 protein_coding Homo_sapiens 0 614
ENST00000582193 RPL19-003 protein_coding Homo_sapiens 0 628

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