C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET domain containing (lysine methyltransferase) 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478781 SETD8-007 ENSG00000183955 9606 + 12:123388900-123396409 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaTestisENST00000478781
Transcript ID Liver Ovary Placenta Testis
ENST00000478781 2.889±0.00 26.192±0.00 8.989±0.00 4.919±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000665 CIL_000665_0001 CGP 12:123289109-123409358
CIL_0003J0 CIL_0003J0_0001 CGP 12:123383773-123436717

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100709 Setd8-002 protein_coding Mus_musculus 0 544
ENSMUST00000138766 Setd8-005 processed_transcript Mus_musculus 0 490
ENSMUST00000147969 Setd8-003 processed_transcript Mus_musculus 0 484
ENSMUST00000059580 Setd8-001 protein_coding Mus_musculus 0 484
ENSMUST00000154031 Setd8-006 processed_transcript Mus_musculus 0 483
ENSMUST00000121113 Gm8770-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000134826 Setd8-004 retained_intron Mus_musculus 0 431
ENSMUST00000121929 Gm11424-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000135667 Setd8-009 retained_intron Mus_musculus 0 302
ENSMUST00000143722 Setd8-008 processed_transcript Mus_musculus 0 298

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