C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003J0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183955-ENSG00000150977 CGP 9606 12:123383773-123436717
GeneTranscriptPositionBiotype
ENSG00000150977 (RILPL2)
Rab interacting lysosomal protein-like 2 		ENST00000280571 (RILPL2-001) 123410683-123436717 protein_coding
ENSG00000183955 (SETD8)
SET domain containing (lysine methyltransferase) 8 		ENST00000330479 (SETD8-201) 123383773-123409351 protein_coding
ENST00000402868 (SETD8-001) 123383773-123409358 protein_coding
ENST00000437502 (SETD8-005) 123390042-123407568 protein_coding
ENST00000437519 (SETD8-002) 123384166-123408507 nonsense_mediated_decay
ENST00000461103 (SETD8-003) 123389271-123405074 retained_intron
ENST00000462311 (SETD8-004) 123389483-123391304 retained_intron
ENST00000478781 (SETD8-007) 123388900-123396409 processed_transcript
ENST00000485469 (SETD8-006) 123391380-123404918 processed_transcript
ENST00000537270 (SETD8-009) 123384173-123388757 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0003J0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049327-ENSMUSG00000029401 CGP 10090 5:124439930-124478366
GeneTranscriptPositionBiotype
ENSMUSG00000029401 (Rilpl2)
Rab interacting lysosomal protein-like 2 		ENSMUST00000031347 (Rilpl2-001) 124463265-124478366 protein_coding
ENSMUSG00000049327 (Setd8)
SET domain containing (lysine methyltransferase) 8 		ENSMUST00000059580 (Setd8-001) 124439930-124462308 protein_coding
ENSMUST00000100709 (Setd8-002) 124445493-124460883 protein_coding
ENSMUST00000125588 (Setd8-010) 124451171-124460837 retained_intron
ENSMUST00000134826 (Setd8-004) 124445784-124450879 retained_intron
ENSMUST00000135667 (Setd8-009) 124450402-124459901 retained_intron
ENSMUST00000138766 (Setd8-005) 124446704-124457118 processed_transcript
ENSMUST00000143722 (Setd8-008) 124450171-124457118 processed_transcript
ENSMUST00000147692 (Setd8-007) 124447005-124450784 processed_transcript
ENSMUST00000147969 (Setd8-003) 124445505-124460977 processed_transcript
ENSMUST00000154031 (Setd8-006) 124446962-124460631 processed_transcript
ENSMUSG00000082402 (Gm15621)
predicted gene 15621 		ENSMUST00000119162 (Gm15621-001) 124472427-124472790 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J0_0001ENSG00000150977ENST00000280571ENSG00000183955ENST00000330479ENST00000402868ENST00000437502ENST00000437519ENST00000461103ENST00000462311ENST00000478781ENST00000485469ENST00000537270CIL_0003J0_0002ENSMUSG00000029401ENSMUST00000031347ENSMUSG00000049327ENSMUST00000059580ENSMUST00000100709ENSMUST00000125588ENSMUST00000134826ENSMUST00000135667ENSMUST00000138766ENSMUST00000143722ENSMUST00000147692ENSMUST00000147969ENSMUST00000154031ENSMUSG00000082402ENSMUST00000119162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J0_0001ENSG00000150977ENST00000280571ENSG00000183955ENST00000330479ENST00000402868ENST00000437502ENST00000437519ENST00000461103ENST00000478781CIL_0003J0_0002ENSMUSG00000029401ENSMUST00000031347ENSMUSG00000049327ENSMUST00000059580ENSMUST00000100709ENSMUST00000125588ENSMUST00000134826ENSMUST00000135667ENSMUST00000147692ENSMUST00000154031ENSMUSG00000082402ENSMUST00000119162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150977 ENST00000280571 7.931±0.00 8.274±0.00 0.914±0.00 1.057±0.73 2.605±1.92 1.939±1.78 0.760±0.60 2.231±1.83 1.022±0.18 4.447±3.14 0.401±0.32 3.126±1.45 2.941±0.75 2.693±1.77
ENSG00000183955 ENST00000330479 N/A N/A N/A N/A N/A 0.667±0.00 N/A 0.580±0.00 0.307±0.00 N/A N/A 0.578±0.00 N/A N/A
ENST00000402868 1.324±0.00 3.070±0.00 N/A 3.057±0.00 2.347±0.00 1.355±0.00 1.213±0.91 1.094±0.00 0.462±0.09 1.213±0.49 1.367±0.00 4.899±1.46 3.920±0.73 3.635±1.85
ENST00000437502 N/A N/A N/A 1.913±0.00 N/A N/A 2.059±0.00 N/A 2.413±0.00 N/A 1.446±0.00 3.100±0.00 3.617±0.00 3.068±0.00
ENST00000437519 N/A N/A N/A 0.927±0.00 1.021±0.00 2.518±0.00 N/A 0.701±0.00 1.393±0.00 3.407±0.00 N/A 7.395±4.69 6.372±0.00 2.923±0.00
ENST00000461103 N/A N/A 0.630±0.00 3.178±0.00 N/A N/A N/A N/A N/A 1.527±0.00 N/A N/A 4.667±0.00 2.236±0.00
ENST00000462311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478781 N/A N/A N/A N/A N/A N/A N/A N/A 2.889±0.00 N/A N/A 26.192±0.00 8.989±0.00 4.919±0.00
ENST00000485469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029401 ENSMUST00000031347 15.725±4.09 14.421±5.75 8.952±1.18 7.212±0.68 14.644±6.08 8.266±2.55 3.011±0.31 20.700±1.29 6.501±2.36 9.751±0.90 2.553±0.36 23.070±4.27 21.633±7.90 10.865±2.71
ENSMUSG00000049327 ENSMUST00000059580 13.709±10.86 11.065±3.71 6.454±0.87 16.549±2.16 8.510±3.09 14.184±3.44 N/A 11.606±5.63 19.341±19.32 4.604±0.80 21.760±15.20 10.279±5.26 27.870±12.24 3.620±0.48
ENSMUST00000100709 7.774±0.00 8.325±1.16 5.621±0.00 4.807±0.00 N/A 15.549±2.99 N/A N/A 1.935±0.34 N/A 11.711±1.44 11.358±1.22 12.911±0.00 N/A
ENSMUST00000125588 24.279±6.24 N/A N/A 10.093±0.00 16.257±1.25 N/A N/A 16.289±0.52 38.807±0.00 9.771±0.00 N/A 16.825±0.00 27.112±0.00 4.144±0.22
ENSMUST00000134826 N/A 14.792±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135667 N/A N/A N/A 17.910±0.00 N/A N/A N/A N/A N/A N/A N/A 93.653±0.00 169.201±61.59 44.612±0.00
ENSMUST00000138766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147692 N/A N/A N/A 50.848±0.00 N/A N/A N/A N/A N/A N/A N/A 249.226±0.00 476.430±153.35 49.049±0.00
ENSMUST00000147969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.722±2.27 89.729±18.54 N/A
ENSMUSG00000082402 ENSMUST00000119162 0.306±0.13 N/A 0.041±0.00 N/A 0.374±0.05 N/A 0.152±0.00 0.542±0.22 0.107±0.02 0.610±0.38 0.169±0.00 0.536±0.39 0.078±0.00 0.440±0.09

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