C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480661 RPL22-003 ENSG00000116251 9606 - 1:6186575-6199563 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000480661
Transcript ID Testis
ENST00000480661 8.627±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019L CIL_00019L_0002 CGP 1:6181269-6221299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 531
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 531
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 477
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 475
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000118297 Gm13196-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 0 331
ENSMUST00000150485 Rpl22-006 processed_transcript Mus_musculus 0 311
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 0 292
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 0 276
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 4.2039e-45 187

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