C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transportin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115251 Tnpo3-201 ENSMUSG00000012535 10090 - 6:29540827-29609607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000115251
Transcript ID Adrenal Ovary
ENSMUST00000115251 5.918±0.97 8.865±3.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YB CIL_0001YB_0002 CGP 6:29526625-29609887
CIL_0001YG CIL_0001YG_0002 CGP 6:29540827-29718559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0035048 ISS splicing factor protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265388 TNPO3-001 protein_coding Homo_sapiens 0 4017
ENST00000402760 RP4-753D5.3-001 processed_pseudogene Homo_sapiens 0 464
ENST00000471166 TNPO3-005 protein_coding Homo_sapiens 0 1903
ENST00000471234 TNPO3-003 protein_coding Homo_sapiens 0 2061
ENST00000482320 TNPO3-002 protein_coding Homo_sapiens 0 3781
ENST00000603089 CTD-2230M5.3-001 processed_pseudogene Homo_sapiens 0 562

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