Transcript ID | Kidney |
---|---|
ENST00000482687 | 1.815±0.00 |
Transcript Info |
||||||
Description: | aprataxin | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000482687 | APTX-015 | ENSG00000137074 | 9606 | - | 9:32972618-32990088 | nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_000655 | CIL_000655_0001 | CGP | 9:32783499-33025168 |
CIL_00061D | CIL_00061D_0001 | CGP | 9:32972606-33039907 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000012 | IDA | single strand break repair |
GO:0000738 | IEA | DNA catabolic process, exonucleolytic |
GO:0000785 | IDA | chromatin |
GO:0000790 | IDA | nuclear chromatin |
GO:0003682 | IDA | chromatin binding |
GO:0003684 | IDA | damaged DNA binding |
GO:0003690 | IDA | double-stranded DNA binding |
GO:0003725 | IDA | double-stranded RNA binding |
GO:0005515 | IPI:IEA | protein binding |
GO:0005634 | IDA | nucleus |
GO:0005654 | IDA | nucleoplasm |
GO:0005730 | IDA | nucleolus |
GO:0005737 | IEA | cytoplasm |
GO:0006302 | IDA | double-strand break repair |
GO:0006974 | IMP | cellular response to DNA damage stimulus |
GO:0008219 | IEA | cell death |
GO:0008967 | IDA | phosphoglycolate phosphatase activity |
GO:0016311 | IDA | dephosphorylation |
GO:0031647 | IMP | regulation of protein stability |
GO:0033699 | IDA | DNA 5'-adenosine monophosphate hydrolase activity |
GO:0042542 | IDA | response to hydrogen peroxide |
GO:0046403 | IDA | polynucleotide 3'-phosphatase activity |
GO:0046872 | IEA | metal ion binding |
GO:0047485 | IPI | protein N-terminus binding |
GO:0051219 | IPI | phosphoprotein binding |
GO:0098506 | IDA | polynucleotide 3' dephosphorylation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000068125 | Aptx-004 | protein_coding | Mus_musculus | 0 | 562 |
ENSMUST00000030119 | Aptx-001 | protein_coding | Mus_musculus | 0 | 562 |
ENSMUST00000129021 | Aptx-002 | nonsense_mediated_decay | Mus_musculus | 0 | 529 |
ENSMUST00000155710 | Aptx-005 | nonsense_mediated_decay | Mus_musculus | 0 | 363 |
ENSMUST00000108103 | Aptx-003 | protein_coding | Mus_musculus | 0 | 311 |
ENSMUST00000128810 | Aptx-006 | processed_transcript | Mus_musculus | 7e-17 | 94 |