C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Zic family member 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000484399  |
ZIC4-004 |
ENSG00000174963 |
9606 | - |
3:147388426-147404284  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JF | CIL_0007JF_0001 | UCNEbase | 3:146747615-148369526 |
| CIL_00092K | CIL_00092K_0001 | VISTA | 3:147012442-147613983 |
| CIL_00092J | CIL_00092J_0001 | VISTA | 3:147031749-147633313 |
| CIL_0008O7 | CIL_0008O7_0001 | VISTA | 3:147107359-147708549 |
| CIL_0009D8 | CIL_0009D8_0001 | VISTA | 3:147360760-147962816 |
| CIL_0009BL | CIL_0009BL_0001 | VISTA | 3:147375234-147976562 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | ISS | DNA binding |
| GO:0005634 | ISS | nucleus |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000173933
|
Zic4-003 | protein_coding | Mus_musculus | 0 | 2004 |
|
ENSMUST00000172646
|
Zic4-001 | protein_coding | Mus_musculus | 0 | 1796 |
|
ENSMUST00000066384
|
Zic4-008 | protein_coding | Mus_musculus | 0 | 1692 |
|
ENSMUST00000172858
|
Zic4-010 | retained_intron | Mus_musculus | 0 | 1066 |
|
ENSMUST00000085242
|
Zic4-012 | processed_transcript | Mus_musculus | 0 | 935 |
|
ENSMUST00000170572
|
Zic4-005 | retained_intron | Mus_musculus | 0 | 869 |
|
ENSMUST00000174611
|
Zic4-004 | retained_intron | Mus_musculus | 0 | 865 |
|
ENSMUST00000173054
|
Zic4-011 | protein_coding | Mus_musculus | 0 | 621 |
|
ENSMUST00000174212
|
Zic4-007 | protein_coding | Mus_musculus | 0 | 529 |
|
ENSMUST00000065360
|
Zic1-002 | protein_coding | Mus_musculus | 0 | 472 |
|
ENSMUST00000034927
|
Zic1-001 | protein_coding | Mus_musculus | 0 | 472 |
|
ENSMUST00000075888
|
Zic2-001 | protein_coding | Mus_musculus | 0 | 420 |
|
ENSDART00000010774
|
zic2a-001 | protein_coding | Danio_rerio | 0 | 324 |
