C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin 2 (phosphorylase kinase, delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484408 CALM2-009 ENSG00000143933 9606 - 2:47161723-47176453 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungOvaryPlacentaTestisENST00000484408
Transcript ID Brain Kidney Liver Lung Ovary Placenta Testis
ENST00000484408 101.158±0.00 18.572±0.00 31.287±0.00 15.594±0.00 34.125±0.00 73.092±0.00 125.676±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150137 Calm2-002 retained_intron Mus_musculus 0 582
ENSMUST00000040440 Calm2-001 protein_coding Mus_musculus 0 582
ENSMUST00000121087 Gm7308-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000118521 Gm14480-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000117133 Gm15720-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000143965 Calm2-003 retained_intron Mus_musculus 0 374

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