C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485813 SPEG-024 ENSG00000072195 9606 + 2:219445627-219493593 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000485813
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000485813 0.333±0.00 1.912±0.00 2.239±0.00 1.700±0.00 6.185±0.00 8.227±0.00 0.022±0.00 1.017±0.00 23.961±21.55 1.794±1.52 0.545±0.06 3.994±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006O0 CIL_0006O0_0001 CGP 2:219418377-219498287
CIL_0006O1 CIL_0006O1_0001 CGP 2:219434846-219506988

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137868 Speg-003 protein_coding Mus_musculus 0 10060
ENSMUST00000087122 Speg-001 protein_coding Mus_musculus 0 10010
ENSMUST00000113590 Speg-002 protein_coding Mus_musculus 0 2165
ENSMUST00000132222 Speg-004 processed_transcript Mus_musculus 0 1347
ENSMUST00000122266 Speg-009 protein_coding Mus_musculus 0 540
ENSMUST00000113587 Speg-014 protein_coding Mus_musculus 0 540
ENSMUST00000113588 Speg-013 protein_coding Mus_musculus 0 540
ENSMUST00000113589 Speg-008 protein_coding Mus_musculus 0 540
ENSMUST00000148515 Speg-006 protein_coding Mus_musculus 0 507
ENSMUST00000143679 Speg-010 retained_intron Mus_musculus 0 303

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