C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein, kinesin binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487159 TRAK1-006 ENSG00000182606 9606 + 3:42013802-42225889 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000487159
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000487159 5.940±0.00 9.616±0.00 6.970±0.00 10.471±0.00 2.378±0.10 10.296±0.00 5.176±0.00 1.235±0.61 8.997±0.00 3.603±0.00 4.914±1.52 4.071±1.08 4.230±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000484 CIL_000484_0001 CGP 3:41246599-42225889
CIL_0007RR CIL_0007RR_0001 VISTA 3:41771738-42373225
CIL_000483 CIL_000483_0001 CGP 3:42013802-42266207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045903 Trak1-201 protein_coding Mus_musculus 0 3158
ENSDART00000136936 trak1-001 protein_coding Danio_rerio 0 701
ENSDART00000085678 trak1-201 protein_coding Danio_rerio 0 695
ENSDART00000142161 trak1-002 processed_transcript Danio_rerio 0 287

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