C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487595 NUPL2-009 ENSG00000136243 9606 + 7:23182049-23196442 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungMuscleOvaryTestisENST00000487595
Transcript ID Adipose Brain Colon Heart Liver Lung Muscle Ovary Testis
ENST00000487595 1.666±0.00 4.052±0.00 4.567±0.00 1.104±0.00 2.276±0.00 2.930±0.00 0.715±0.00 5.473±0.00 11.153±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022N CIL_00022N_0001 CGP 7:23105758-23201011

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049887 Nupl2-001 protein_coding Mus_musculus 0 483
ENSMUST00000115101 Nupl2-002 nonsense_mediated_decay Mus_musculus 0 357
ENSMUST00000147392 Nupl2-003 retained_intron Mus_musculus 3.00004e-41 172

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