C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27 pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487608 RPS27P23-001 ENSG00000239413 9606 + 12:101424441-101424691 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000487608
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000487608 0.131±0.00 0.063±0.00 0.233±0.00 0.113±0.00 1.052±0.00 0.595±0.00 0.167±0.00 0.648±0.00 1.684±1.55 0.113±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 0 320
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 0 320
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000118179 Rps27-ps1-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 0 235
ENSMUST00000119164 Gm11572-001 processed_pseudogene Mus_musculus 1e-36 156

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