C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class II, DQ beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487676 HLA-DQB1-005 ENSG00000179344 9606 - 6:32659467-32666638 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverLungOvaryTestisENST00000487676
Transcript ID Heart Liver Lung Ovary Testis
ENST00000487676 0.031±0.00 0.340±0.00 0.490±0.00 0.153±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PL CIL_0001PL_0006 CGP 6:32628179-32668383
CIL_0002XS CIL_0002XS_0007 CGP 6:32659467-32747215

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173103 H2-Ab1-003 retained_intron Mus_musculus 0 274
ENSMUST00000040828 H2-Ab1-001 protein_coding Mus_musculus 0 274

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