C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, class II antigen A, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173103 H2-Ab1-003 ENSMUSG00000073421 10090 + 17:34267102-34268034 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000173103
Transcript ID Testis
ENSMUST00000173103 1.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PK CIL_0001PK_0006 CGP 17:34238903-34269418
CIL_0002XS CIL_0002XS_0009 CGP 17:34263209-34287827

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323109 HLA-DQB2-001 protein_coding Homo_sapiens 0 366
ENST00000374943 HLA-DQB1-002 protein_coding Homo_sapiens 0 388
ENST00000383121 HLA-DQB1-001 protein_coding Homo_sapiens 0 416
ENST00000383247 HLA-DQB1-001 protein_coding Homo_sapiens 0 416
ENST00000399065 HLA-DQB1-002 protein_coding Homo_sapiens 0 388
ENST00000399074 HLA-DQB1-002 protein_coding Homo_sapiens 0 399
ENST00000399079 HLA-DQB1-004 protein_coding Homo_sapiens 0 274
ENST00000399082 HLA-DQB1-007 protein_coding Homo_sapiens 0 274
ENST00000399084 HLA-DQB1-003 protein_coding Homo_sapiens 0 388
ENST00000399088 HLA-DQB1-001 protein_coding Homo_sapiens 0 388
ENST00000399658 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000399661 HLA-DQB2-003 protein_coding Homo_sapiens 0 366
ENST00000399670 HLA-DQB1-051 protein_coding Homo_sapiens 0 296
ENST00000411527 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000413089 HLA-DQB1-003 protein_coding Homo_sapiens 0 388
ENST00000414518 HLA-DQB1-001 protein_coding Homo_sapiens 0 399
ENST00000415137 HLA-DQB2-001 protein_coding Homo_sapiens 0 388
ENST00000415926 HLA-DQB1-004 protein_coding Homo_sapiens 0 302
ENST00000416131 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000416192 HLA-DQB1-001 protein_coding Homo_sapiens 0 399
ENST00000417780 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000418419 HLA-DQB2-004 protein_coding Homo_sapiens 0 263
ENST00000419109 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000419519 HLA-DQB2-001 protein_coding Homo_sapiens 0 366
ENST00000419685 HLA-DQB2-003 protein_coding Homo_sapiens 0 388
ENST00000419914 HLA-DQB1-001 protein_coding Homo_sapiens 0 422
ENST00000421468 HLA-DQB2-004 protein_coding Homo_sapiens 0 263
ENST00000421888 HLA-DQB1-002 protein_coding Homo_sapiens 0 422
ENST00000422950 HLA-DQB1-003 protein_coding Homo_sapiens 0 399
ENST00000424530 HLA-DQB1-004 protein_coding Homo_sapiens 0 274
ENST00000424579 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000424806 HLA-DQB1-003 protein_coding Homo_sapiens 0 422
ENST00000426733 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000427449 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000428219 HLA-DQB1-007 protein_coding Homo_sapiens 0 302
ENST00000428972 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000429783 HLA-DQB2-003 protein_coding Homo_sapiens 0 388
ENST00000430668 HLA-DQB2-003 protein_coding Homo_sapiens 0 383
ENST00000430790 HLA-DQB1-007 protein_coding Homo_sapiens 0 279
ENST00000430849 HLA-DQB2-003 protein_coding Homo_sapiens 0 366
ENST00000432486 HLA-DQB2-003 protein_coding Homo_sapiens 0 366
ENST00000432856 HLA-DQB1-006 protein_coding Homo_sapiens 0 250
ENST00000433114 HLA-DQB2-002 protein_coding Homo_sapiens 0 257
ENST00000433801 HLA-DQB2-001 protein_coding Homo_sapiens 0 366
ENST00000433936 HLA-DQB1-007 protein_coding Homo_sapiens 0 274
ENST00000434651 HLA-DQB1-001 protein_coding Homo_sapiens 0 388
ENST00000434886 HLA-DQB1-004 protein_coding Homo_sapiens 0 279
ENST00000435081 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000435145 HLA-DQB2-001 protein_coding Homo_sapiens 0 383
ENST00000437316 HLA-DQB2-003 protein_coding Homo_sapiens 0 383
ENST00000438757 HLA-DQB2-002 protein_coding Homo_sapiens 0 263
ENST00000442043 HLA-DQB2-001 protein_coding Homo_sapiens 0 366
ENST00000442806 HLA-DQB2-001 protein_coding Homo_sapiens 0 383
ENST00000447979 HLA-DQB2-004 protein_coding Homo_sapiens 0 257
ENST00000455520 HLA-DQB2-001 protein_coding Homo_sapiens 0 388
ENST00000456529 HLA-DQB2-002 protein_coding Homo_sapiens 0 263
ENST00000456954 HLA-DQB1-006 protein_coding Homo_sapiens 0 261
ENST00000457432 HLA-DQB2-003 protein_coding Homo_sapiens 0 366
ENST00000457445 HLA-DQB1-006 protein_coding Homo_sapiens 0 239
ENST00000472708 HLA-DQB1-005 retained_intron Homo_sapiens 0 274
ENST00000475182 HLA-DQB1-005 retained_intron Homo_sapiens 0 302
ENST00000479570 HLA-DQB1-005 retained_intron Homo_sapiens 0 279
ENST00000487676 HLA-DQB1-005 retained_intron Homo_sapiens 0 274

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