C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Nedd4 family interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127286 Ndfip2-004 ENSMUSG00000053253 10090 + 14:105292681-105308803 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083L CIL_00083L_0002 VISTA 14:105076563-105679035
CIL_0002EH CIL_0002EH_0002 CGP 14:105106751-105309298

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218652 NDFIP2-001 protein_coding Homo_sapiens 0 510
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 246
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 274
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 263
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 226
ENST00000465762 NDFIP2-002 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 279
ENST00000485656 RP11-273P3.1-001 processed_pseudogene Homo_sapiens 1e-29 134
ENST00000487865 NDFIP2-004 protein_coding Homo_sapiens 0 331
ENST00000488371 RP11-864J10.2-001 processed_pseudogene Homo_sapiens 0 255
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 298
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 272
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 2e-18 95
ENST00000612570 NDFIP2-201 protein_coding Homo_sapiens 0 510
ENST00000620924 NDFIP2-005 protein_coding Homo_sapiens 0 510

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