C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeobox A9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489695 HOXA9-005 ENSG00000078399 9606 - 7:27163682-27169737 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000489695
Transcript ID Brain
ENST00000489695 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0002 UCNEbase 7:26506344-27606703
CIL_0008QL CIL_0008QL_0001 VISTA 7:26816432-27417045
CIL_000911 CIL_000911_0001 VISTA 7:26910239-27511438
CIL_000811 CIL_000811_0001 VISTA 7:26948649-27549872
CIL_00097P CIL_00097P_0001 VISTA 7:27075631-27678581
CIL_0003PA CIL_0003PA_0001 CGP 7:27153716-27175180
CIL_0006I0 CIL_0006I0_0002 CGP 7:27162435-27180013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156540 Hoxa9-003 processed_transcript Mus_musculus 0 593
ENSMUST00000048680 Hoxa9-001 protein_coding Mus_musculus 0 385
ENSMUST00000114425 Hoxa9-002 protein_coding Mus_musculus 0 379
ENSMUST00000154641 Hoxa9-004 processed_transcript Mus_musculus 0 377
ENSMUST00000174115 Hoxa9-005 retained_intron Mus_musculus 0 220

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