C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8974
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175770 Gm8974-001 ENSMUSG00000093525 10090 - 19:46205380-46205858 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000175770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000175770 0.080±0.00 0.242±0.01 0.167±0.02 0.317±0.16 0.229±0.19 0.357±0.17 0.070±0.00 0.075±0.01 0.175±0.14 0.213±0.02 0.365±0.20 0.234±0.00 0.231±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WI CIL_0005WI_0002 CGP 19:46135685-46286510
CIL_0005WJ CIL_0005WJ_0002 CGP 19:46152509-46312090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244520 SNRPC-001 protein_coding Homo_sapiens 0 564
ENST00000374017 SNRPC-002 protein_coding Homo_sapiens 0 549
ENST00000374018 SNRPC-003 protein_coding Homo_sapiens 0 503
ENST00000417250 SNRPCP9-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000424055 SNRPCP15-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000433292 SNRPCP1-001 processed_pseudogene Homo_sapiens 0 270
ENST00000474635 SNRPC-004 processed_transcript Homo_sapiens 0 411
ENST00000481033 SNRPCP10-001 processed_pseudogene Homo_sapiens 0 200
ENST00000492453 SNRPCP11-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000514820 SNRPCP8-001 processed_pseudogene Homo_sapiens 0 191
ENST00000520330 SNRPCP17-001 processed_pseudogene Homo_sapiens 7.00649e-43 176
ENST00000524498 SNRPCP14-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000528310 SNRPCP6-001 processed_pseudogene Homo_sapiens 0 195
ENST00000531775 SNRPCP5-001 processed_pseudogene Homo_sapiens 5.04467e-44 180
ENST00000588011 SNRPCP20-001 processed_pseudogene Homo_sapiens 5e-39 163
ENST00000622868 RP11-90D4.4-001 processed_pseudogene Homo_sapiens 0 200

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