C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494084 CTD-2013N17.1-001 ENSG00000240418 9606 + 19:16412684-16413576 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000494084
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000494084 0.163±0.00 0.325±0.00 0.029±0.00 0.054±0.00 0.146±0.00 0.107±0.02 0.052±0.00 0.022±0.00 0.326±0.00 0.473±0.00 0.175±0.11 0.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DX CIL_0004DX_0002 CGP 19:16324817-16472085
CIL_00072E CIL_00072E_0001 CGP 19:16355239-16496192

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 628
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 555
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 555
ENSMUST00000183369 Gm18014-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000119349 Gm11524-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 0 302
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 1.4013e-45 187
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 3e-23 113

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