C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11524
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119349 Gm11524-001 ENSMUSG00000083651 10090 + 11:96870195-96871001 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENSMUST00000119349
Transcript ID Muscle Testis
ENSMUST00000119349 0.094±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 425
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 470
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 403
ENST00000447334 RPS2P7-001 processed_pseudogene Homo_sapiens 0 420
ENST00000447420 RP4-803A2.2-001 unprocessed_pseudogene Homo_sapiens 0 320
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 226
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 427
ENST00000494084 CTD-2013N17.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000494359 RP11-452G18.2-001 processed_pseudogene Homo_sapiens 0 387
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 381

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