C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5070
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177599 Gm5070-001 ENSMUSG00000096177 10090 - 3:95410346-95411207 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177599 0.304±0.22 0.143±0.09 0.039±0.02 0.141±0.04 0.243±0.09 0.176±0.06 0.128±0.07 0.098±0.04 0.083±0.10 0.128±0.08 0.042±0.00 0.190±0.09 0.087±0.07 23.815±11.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 708
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 876
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 723
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 832
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 869
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 761
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 763
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 723
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 763
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 809
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 3e-40 167
ENST00000443009 RP11-306I1.1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 760
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 647
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 867
ENST00000456516 RP11-34E5.4-001 processed_pseudogene Homo_sapiens 0 329
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 675
ENST00000469884 RP11-6K23.1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000476944 RPS2P4-001 processed_pseudogene Homo_sapiens 0 839
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 691
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 830
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 859
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 717
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 579
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 715
ENST00000494084 CTD-2013N17.1-001 processed_pseudogene Homo_sapiens 0 754
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 412
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 222
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 409
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 409
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 706
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 222
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 726
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 726
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 409
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 610
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 610
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 636
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 641
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 730

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