C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 3 pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494195 HMGB3P14-001 ENSG00000231845 9606 + 3:134170487-134171085 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungOvaryPlacentaENST00000494195
Transcript ID Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000494195 0.196±0.00 0.212±0.19 1.048±0.00 1.421±0.00 0.571±0.00 0.070±0.02 0.069±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 377
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 377
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 377
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 377
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 370
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 268

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