C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12365
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117931 Gm12365-001 ENSMUSG00000083851 10090 + 4:35436214-35436781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000117931
Transcript ID Brain
ENSMUST00000117931 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061K CIL_00061K_0002 CGP 4:35191285-36951747

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325307 HMGB3-001 protein_coding Homo_sapiens 0 630
ENST00000393368 HMGB3P1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000417997 HMGB3P20-001 processed_pseudogene Homo_sapiens 0 494
ENST00000419110 HMGB3-002 protein_coding Homo_sapiens 0 614
ENST00000433260 HMGB3P24-001 processed_pseudogene Homo_sapiens 0 540
ENST00000434734 HMGB3P10-001 processed_pseudogene Homo_sapiens 0 470
ENST00000438745 HMGB3P12-001 processed_pseudogene Homo_sapiens 0 235
ENST00000440127 HMGB3P11-001 processed_pseudogene Homo_sapiens 0 505
ENST00000441799 HMGB3P9-001 processed_pseudogene Homo_sapiens 0 407
ENST00000442010 HMGB3P22-002 processed_transcript Homo_sapiens 0 287
ENST00000444896 HMGB3P6-001 processed_pseudogene Homo_sapiens 0 599
ENST00000448905 HMGB3-201 protein_coding Homo_sapiens 0 630
ENST00000449709 HMGB3P8-001 processed_pseudogene Homo_sapiens 0 538
ENST00000451823 HMGB3P22-001 transcribed_processed_pseudogene Homo_sapiens 0 472
ENST00000455596 HMGB3-003 protein_coding Homo_sapiens 0 630
ENST00000457863 HMGB3P30-001 processed_pseudogene Homo_sapiens 0 540
ENST00000494195 HMGB3P14-001 processed_pseudogene Homo_sapiens 0 268
ENST00000504195 HMGB3P17-001 processed_pseudogene Homo_sapiens 0 215
ENST00000510526 HMGB3P3-001 processed_pseudogene Homo_sapiens 0 278
ENST00000511263 HMGB3P13-001 processed_pseudogene Homo_sapiens 0 257
ENST00000528472 CTD-2028E8.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000560051 HMGB3P26-001 processed_pseudogene Homo_sapiens 0 455
ENST00000588063 RP11-861E21.3-001 processed_pseudogene Homo_sapiens 0 516
ENST00000589177 HMGB3P27-001 processed_pseudogene Homo_sapiens 0 542

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