C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494559 PDZRN3-007 ENSG00000121440 9606 - 3:73382433-73400965 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleOvaryPlacentaTestisENST00000494559
Transcript ID Brain Colon Muscle Ovary Placenta Testis
ENST00000494559 2.635±0.10 8.233±0.00 1.550±0.00 4.320±2.19 5.077±0.00 2.444±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098G CIL_00098G_0001 VISTA 3:73222646-73825117

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075994 Pdzrn3-001 protein_coding Mus_musculus 0 1014
ENSMUST00000035399 Pdzrn4-201 protein_coding Mus_musculus 0 329
ENSMUST00000169942 Pdzrn4-202 protein_coding Mus_musculus 0 329

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