C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00098G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm682 VISTA 9606 3:73222646-73825117
GeneTranscriptPositionBiotype
ENSG00000121440 (PDZRN3)
PDZ domain containing ring finger 3 		ENST00000263666 (PDZRN3-001) 73382433-73624940 protein_coding
ENST00000308537 (PDZRN3-002) 73408058-73624840 protein_coding
ENST00000462146 (PDZRN3-005) 73382899-73474632 protein_coding
ENST00000466348 (PDZRN3-010) 73385698-73402503 processed_transcript
ENST00000466780 (PDZRN3-004) 73383079-73561618 protein_coding
ENST00000477434 (PDZRN3-009) 73391084-73404563 retained_intron
ENST00000478209 (PDZRN3-012) 73384470-73388146 retained_intron
ENST00000479530 (PDZRN3-006) 73383136-73433904 protein_coding
ENST00000484487 (PDZRN3-011) 73387987-73401082 retained_intron
ENST00000492909 (PDZRN3-003) 73384183-73569461 protein_coding
ENST00000494559 (PDZRN3-007) 73382433-73400965 protein_coding
ENST00000498048 (PDZRN3-008) 73391102-73556938 processed_transcript
ENSG00000242364 (RP11-451J24.1)
 ENST00000495472 (RP11-451J24.1-001) 73648399-73648807 processed_pseudogene
ENSG00000242741 (RP11-20B7.1)
 ENST00000498832 (RP11-20B7.1-001) 73808601-73902866 lincRNA
ENSG00000278934 (CTD-2006M22.2)
 ENST00000625169 (CTD-2006M22.2-001) 73624410-73627626 TEC
CIL_00098G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm682 VISTA 10090 6:100979930-101582506
GeneTranscriptPositionBiotype
ENSMUSG00000035357 (Pdzrn3)
PDZ domain containing RING finger 3 		ENSMUST00000075994 (Pdzrn3-001) 101149609-101377897 protein_coding
ENSMUST00000124884 (Pdzrn3-004) 101156973-101355010 processed_transcript
ENSMUST00000144505 (Pdzrn3-002) 101169856-101199200 retained_intron
ENSMUST00000151175 (Pdzrn3-003) 101179878-101377342 protein_coding
ENSMUSG00000097834 (Gm26911)
predicted gene, 26911 		ENSMUST00000181770 (Gm26911-201) 101198569-101210269 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098G_0001ENSG00000121440ENST00000263666ENST00000308537ENST00000462146ENST00000466348ENST00000466780ENST00000477434ENST00000478209ENST00000479530ENST00000484487ENST00000492909ENST00000494559ENST00000498048ENSG00000242364ENST00000495472ENSG00000242741ENST00000498832ENSG00000278934ENST00000625169CIL_00098G_0002ENSMUSG00000035357ENSMUST00000075994ENSMUST00000124884ENSMUST00000144505ENSMUST00000151175ENSMUSG00000097834ENSMUST00000181770
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098G_0001ENSG00000121440ENST00000263666ENST00000462146ENST00000466780ENST00000478209ENST00000479530ENST00000484487ENST00000492909ENST00000494559ENSG00000242364ENST00000495472ENSG00000242741ENST00000498832ENSG00000278934ENST00000625169CIL_00098G_0002ENSMUSG00000035357ENSMUST00000075994ENSMUST00000144505ENSMUSG00000097834ENSMUST00000181770
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121440 ENST00000263666 3.968±0.00 5.149±0.00 0.778±0.00 1.677±0.73 7.069±6.07 6.011±3.43 11.130±6.65 4.853±0.00 7.981±0.00 4.407±0.00 5.085±0.00 13.175±12.05 4.225±1.17 3.542±2.13
ENST00000308537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462146 N/A N/A 0.518±0.00 N/A N/A N/A 1.805±0.00 0.213±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466780 N/A N/A N/A 4.303±0.15 1.588±0.00 N/A 8.613±0.00 0.218±0.00 6.676±0.00 1.716±0.00 1.097±0.00 23.009±0.00 1.635±0.11 N/A
ENST00000477434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.217±0.00 N/A N/A N/A
ENST00000479530 5.070±0.00 6.622±0.00 0.662±0.00 N/A 8.829±0.00 13.371±0.00 N/A N/A 0.074±0.00 0.570±0.00 N/A N/A N/A 5.234±0.00
ENST00000484487 N/A N/A N/A N/A N/A N/A N/A 0.707±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.484±0.00 N/A N/A N/A
ENST00000494559 N/A N/A N/A 2.635±0.10 N/A 8.233±0.00 N/A N/A N/A N/A 1.550±0.00 4.320±2.19 5.077±0.00 2.444±0.93
ENST00000498048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242364 ENST00000495472 N/A 0.053±0.00 N/A 0.062±0.00 N/A N/A 0.051±0.00 N/A N/A 0.055±0.00 N/A N/A N/A 0.050±0.00
ENSG00000242741 ENST00000498832 0.128±0.00 N/A N/A 0.171±0.00 0.065±0.00 N/A 0.044±0.00 N/A 0.219±0.00 N/A N/A 0.029±0.01 N/A N/A
ENSG00000278934 ENST00000625169 N/A N/A N/A N/A N/A N/A 6.508±0.00 N/A N/A N/A N/A N/A 0.686±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035357 ENSMUST00000075994 14.640±4.12 15.258±2.73 27.506±5.70 8.925±8.85 6.775±2.99 12.675±1.36 4.764±0.56 4.499±0.48 1.064±0.48 8.156±2.11 20.005±4.68 19.060±5.87 3.689±2.10 0.443±0.19
ENSMUST00000124884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
ENSMUST00000151175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097834 ENSMUST00000181770 0.187±0.15 0.164±0.09 0.193±0.00 0.206±0.08 0.174±0.08 0.086±0.03 0.037±0.03 0.086±0.06 0.020±0.02 0.110±0.03 0.029±0.00 0.147±0.17 0.116±0.07 0.670±0.09

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