C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00098G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm682 VISTA 9606 3:73222646-73825117
GeneTranscriptPositionBiotype
ENSG00000121440 (PDZRN3)
PDZ domain containing ring finger 3 		ENST00000263666 (PDZRN3-001) 73382433-73624940 protein_coding
ENST00000308537 (PDZRN3-002) 73408058-73624840 protein_coding
ENST00000462146 (PDZRN3-005) 73382899-73474632 protein_coding
ENST00000466348 (PDZRN3-010) 73385698-73402503 processed_transcript
ENST00000466780 (PDZRN3-004) 73383079-73561618 protein_coding
ENST00000477434 (PDZRN3-009) 73391084-73404563 retained_intron
ENST00000478209 (PDZRN3-012) 73384470-73388146 retained_intron
ENST00000479530 (PDZRN3-006) 73383136-73433904 protein_coding
ENST00000484487 (PDZRN3-011) 73387987-73401082 retained_intron
ENST00000492909 (PDZRN3-003) 73384183-73569461 protein_coding
ENST00000494559 (PDZRN3-007) 73382433-73400965 protein_coding
ENST00000498048 (PDZRN3-008) 73391102-73556938 processed_transcript
ENSG00000242364 (RP11-451J24.1)
 ENST00000495472 (RP11-451J24.1-001) 73648399-73648807 processed_pseudogene
ENSG00000242741 (RP11-20B7.1)
 ENST00000498832 (RP11-20B7.1-001) 73808601-73902866 lincRNA
ENSG00000278934 (CTD-2006M22.2)
 ENST00000625169 (CTD-2006M22.2-001) 73624410-73627626 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00098G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm682 VISTA 10090 6:100979930-101582506
GeneTranscriptPositionBiotype
ENSMUSG00000035357 (Pdzrn3)
PDZ domain containing RING finger 3 		ENSMUST00000075994 (Pdzrn3-001) 101149609-101377897 protein_coding
ENSMUST00000124884 (Pdzrn3-004) 101156973-101355010 processed_transcript
ENSMUST00000144505 (Pdzrn3-002) 101169856-101199200 retained_intron
ENSMUST00000151175 (Pdzrn3-003) 101179878-101377342 protein_coding
ENSMUSG00000097834 (Gm26911)
predicted gene, 26911 		ENSMUST00000181770 (Gm26911-201) 101198569-101210269 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098G_0001ENSG00000121440ENST00000263666ENST00000308537ENST00000462146ENST00000466348ENST00000466780ENST00000477434ENST00000478209ENST00000479530ENST00000484487ENST00000492909ENST00000494559ENST00000498048ENSG00000242364ENST00000495472ENSG00000242741ENST00000498832ENSG00000278934ENST00000625169CIL_00098G_0002ENSMUSG00000035357ENSMUST00000075994ENSMUST00000124884ENSMUST00000144505ENSMUST00000151175ENSMUSG00000097834ENSMUST00000181770
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098G_0001ENSG00000121440ENST00000263666ENST00000462146ENST00000466780ENST00000478209ENST00000479530ENST00000484487ENST00000492909ENST00000494559ENSG00000242364ENST00000495472ENSG00000242741ENST00000498832ENSG00000278934ENST00000625169CIL_00098G_0002ENSMUSG00000035357ENSMUST00000075994ENSMUST00000144505ENSMUSG00000097834ENSMUST00000181770
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121440 ENST00000263666 3.968±0.00 5.149±0.00 0.778±0.00 1.677±0.73 7.069±6.07 6.011±3.43 11.130±6.65 4.853±0.00 7.981±0.00 4.407±0.00 5.085±0.00 13.175±12.05 4.225±1.17 3.542±2.13
ENST00000308537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462146 N/A N/A 0.518±0.00 N/A N/A N/A 1.805±0.00 0.213±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466780 N/A N/A N/A 4.303±0.15 1.588±0.00 N/A 8.613±0.00 0.218±0.00 6.676±0.00 1.716±0.00 1.097±0.00 23.009±0.00 1.635±0.11 N/A
ENST00000477434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.217±0.00 N/A N/A N/A
ENST00000479530 5.070±0.00 6.622±0.00 0.662±0.00 N/A 8.829±0.00 13.371±0.00 N/A N/A 0.074±0.00 0.570±0.00 N/A N/A N/A 5.234±0.00
ENST00000484487 N/A N/A N/A N/A N/A N/A N/A 0.707±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.484±0.00 N/A N/A N/A
ENST00000494559 N/A N/A N/A 2.635±0.10 N/A 8.233±0.00 N/A N/A N/A N/A 1.550±0.00 4.320±2.19 5.077±0.00 2.444±0.93
ENST00000498048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242364 ENST00000495472 N/A 0.053±0.00 N/A 0.062±0.00 N/A N/A 0.051±0.00 N/A N/A 0.055±0.00 N/A N/A N/A 0.050±0.00
ENSG00000242741 ENST00000498832 0.128±0.00 N/A N/A 0.171±0.00 0.065±0.00 N/A 0.044±0.00 N/A 0.219±0.00 N/A N/A 0.029±0.01 N/A N/A
ENSG00000278934 ENST00000625169 N/A N/A N/A N/A N/A N/A 6.508±0.00 N/A N/A N/A N/A N/A 0.686±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035357 ENSMUST00000075994 14.640±4.12 15.258±2.73 27.506±5.70 8.925±8.85 6.775±2.99 12.675±1.36 4.764±0.56 4.499±0.48 1.064±0.48 8.156±2.11 20.005±4.68 19.060±5.87 3.689±2.10 0.443±0.19
ENSMUST00000124884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
ENSMUST00000151175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097834 ENSMUST00000181770 0.187±0.15 0.164±0.09 0.193±0.00 0.206±0.08 0.174±0.08 0.086±0.03 0.037±0.03 0.086±0.06 0.020±0.02 0.110±0.03 0.029±0.00 0.147±0.17 0.116±0.07 0.670±0.09

Loading