C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494618 NCL-014 ENSG00000115053 9606 - 2:231457426-231460725 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryENST00000494618
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary
ENST00000494618 7.704±0.00 3.827±0.00 20.335±0.00 16.847±0.00 2.278±0.00 6.424±0.00 8.142±0.00 4.996±0.00 12.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0004KZ CIL_0004KZ_0002 CGP 2:231395543-231483641
CIL_00076N CIL_00076N_0001 CGP 2:231453531-231530495

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185676 Ncl-002 retained_intron Mus_musculus 0 710
ENSMUST00000027438 Ncl-001 protein_coding Mus_musculus 0 704

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