C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein 48kDa (U11/U12)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496946 SNRNP48-002 ENSG00000168566 9606 + 6:7599673-7609206 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryTestisENST00000496946
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000496946 1.472±0.00 0.240±0.00 1.676±0.00 0.983±0.00 0.442±0.00 0.464±0.00 1.237±0.00 1.186±0.00 0.669±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T6 CIL_0007T6_0001 VISTA 6:7260927-7862502
CIL_00037Z CIL_00037Z_0001 CGP 6:7541575-7611967
CIL_000380 CIL_000380_0001 CGP 6:7590199-7881422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091641 Snrnp48-201 protein_coding Mus_musculus 0 721
ENSMUST00000178564 Snrnp48-202 protein_coding Mus_musculus 0 307

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