C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00037Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096696-ENSG00000168566 CGP 9606 6:7541575-7611967
GeneTranscriptPositionBiotype
ENSG00000096696 (DSP)
desmoplakin 		ENST00000379802 (DSP-001) 7541575-7586717 protein_coding
ENST00000418664 (DSP-002) 7541617-7586572 protein_coding
ENST00000506617 (DSP-007) 7559286-7565817 retained_intron
ENSG00000168566 (SNRNP48)
small nuclear ribonucleoprotein 48kDa (U11/U12) 		ENST00000342415 (SNRNP48-001) 7590199-7611967 protein_coding
ENST00000496946 (SNRNP48-002) 7599673-7609206 retained_intron
CIL_00037Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054889-ENSMUSG00000021431 CGP 10090 13:38151328-38227663
GeneTranscriptPositionBiotype
ENSMUSG00000021431 (Snrnp48)
small nuclear ribonucleoprotein 48 (U11/U12) 		ENSMUST00000091641 (Snrnp48-201) 38204939-38227663 protein_coding
ENSMUST00000178564 (Snrnp48-202) 38204951-38226922 protein_coding
ENSMUSG00000054889 (Dsp)
desmoplakin 		ENSMUST00000124830 (Dsp-001) 38151348-38198577 protein_coding
ENSMUST00000127906 (Dsp-002) 38151328-38198577 protein_coding
ENSMUST00000145151 (Dsp-003) 38178367-38182234 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037Z_0001ENSG00000096696ENST00000379802ENST00000418664ENST00000506617ENSG00000168566ENST00000342415ENST00000496946CIL_00037Z_0002ENSMUSG00000021431ENSMUST00000091641ENSMUST00000178564ENSMUSG00000054889ENSMUST00000124830ENSMUST00000127906ENSMUST00000145151
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037Z_0001ENSG00000096696ENST00000379802ENST00000418664ENSG00000168566ENST00000342415ENST00000496946CIL_00037Z_0002ENSMUSG00000021431ENSMUST00000091641ENSMUST00000178564ENSMUSG00000054889ENSMUST00000124830ENSMUST00000127906
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096696 ENST00000379802 2.029±0.00 1.523±0.00 5.676±0.00 0.703±0.15 6.228±1.94 9.006±6.89 38.793±27.34 8.843±1.07 3.949±1.15 4.071±0.79 0.094±0.04 18.391±18.51 21.175±11.85 1.308±0.77
ENST00000418664 0.957±0.00 1.097±0.00 2.407±0.00 0.451±0.00 5.712±2.04 6.646±1.90 25.533±0.00 5.930±1.61 3.819±3.24 3.427±0.00 0.201±0.00 4.314±2.83 12.975±2.38 0.364±0.00
ENST00000506617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168566 ENST00000342415 2.172±0.00 1.825±0.00 0.351±0.00 0.800±0.36 1.881±0.22 2.165±0.90 1.842±0.03 2.002±1.02 1.342±0.12 1.023±0.56 4.058±0.00 2.959±1.85 1.798±1.27 2.301±0.57
ENST00000496946 N/A N/A 1.472±0.00 0.240±0.00 1.676±0.00 0.983±0.00 0.442±0.00 0.464±0.00 1.237±0.00 N/A N/A 1.186±0.00 N/A 0.669±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021431 ENSMUST00000091641 1.976±0.00 13.025±1.28 3.626±0.00 3.373±0.00 N/A 3.540±0.39 1.608±0.00 2.385±0.70 3.612±1.46 N/A 2.318±0.55 4.712±1.66 4.124±1.62 2.173±0.61
ENSMUST00000178564 10.275±2.43 15.821±5.44 7.503±0.00 N/A 26.825±8.61 24.463±5.65 6.588±1.38 11.301±1.80 9.722±3.61 24.940±0.00 1.523±0.19 37.033±8.89 19.833±16.55 14.455±10.25
ENSMUSG00000054889 ENSMUST00000124830 0.623±0.43 0.089±0.04 5.527±0.84 0.306±0.07 0.565±0.23 8.203±1.41 25.617±2.69 1.193±0.06 1.446±0.43 3.550±1.86 0.078±0.00 3.918±4.18 29.269±20.46 0.063±0.00
ENSMUST00000127906 0.970±0.92 0.384±0.18 3.066±0.29 0.364±0.23 1.932±0.73 19.123±1.94 24.306±1.07 1.201±0.52 1.331±0.79 4.751±1.76 0.050±0.06 3.387±2.07 19.093±11.91 0.211±0.03
ENSMUST00000145151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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